Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015883809.1_cds_XP_016438615.1_34260
CDS Infomation

[gene=LOC107764539] [db_xref=GeneID:107764539] [protein=kelch-like protein 5] [partial=5'] [protein_id=XP_016438615.1] [location=complement(join(6230..6328,6424..6610,6783..6884,7208..7284,7778..7977,8071..8389,8861..8938,9039..9653,9760..>10014))] [gbkey=CDS]
Sequence

TTGATTATTACTTTATTCTTGTTTCATTTTGTCACCCTTTACTCAATTATACGCATATTG
AAATCTTTGACAGGTTTGCCTATTGAACACTTTTCATATGTGAAAAATGTACATCCTGGT
TTGCCACTGTTCTTGTTCAACTACAACGATAGGAAGATCCATGGAATCTTCGAGGCAGTA
AGCTCTGGTCAAATGCATATCAATCCATATTCTTGGACATCAGATGGTTATGAAAAAACA
CGATATCCTGCACAGGTTCAGATACGTGTCCGTCTGCAGTGTCAACCACTGCCAGAAAAT
CAGTTTAAACCAATAATATTGGATAACTATTATAGTCAGAACCATTTCTGGTTTGAGCTA
GATCATGTTCAATCTAATAAATTGATCTCCAAACTGGCATCTCTTGCAATTGCTCCAAGT
AAAACACTGTATAACTCAGCAAACTGGGGAAATATAATCCAAGATCTACCTGAAAATGTC
ATGATAGCGGATAATGGATCTTTTGAGCCACAAGTCTTGGAAAATAAGTCGTCCAGTTCC
GTTGATGTGAACAGGAAGTTCGGTGCCGGAGACATTTCTCCTTGTTCAAAGGGCAGTGTT
CTGCAGTTGGAGTCACCACTTGATTTTCACGCTGCACTAGATGAGAAGGATTTTATATAC
AAGAAACTCAGAGAATTAGTTCTTGAGCGTGAATGTTCAGGGGCCCCTACAAATGGACAT
GCAGAGGAAAGAACCAACGAAGTGCTAGGTAACCCTGTAAATGATGTAAGCATTGGCAAA
GCAGCTTTTCGGAAAGCACGGCTTCCTGGAGAAGAGAAGAATGAAGAAAGCTCCTGTGAC
TCGGCTGTTTATCCTTCTTTTGTAGTTCAGCTGCTTCAAGGAATGGAGGAACTAATAGCT
TTTAACGAAGAGCAACATAAAAAGATGGGTGGTCTGGAGCAGAAGCTGGCTGATATACAA
GAAGAAATTAAACTGTTAAAAAATAAATGCTTGATGTTGGAGTCCTCAAATCCTTTGCGT
ACACATGCTGGTGAAAATGTGGTTGATTCAGATGATGTAGCACATCTGAATGATGAGTCA
ATCATCCTAGCTGGAGGATATGATGGTGTATCGTGGTTATCGGCCTTCGACTCATACTCT
CCTTTAAATGATGTCTTCAAGTCACTTAAGCCAATGAATTCAGTTCGATCGTTTTTCGCA
CTTGCAAACCTGAGTAGAGAAATTTATGTATTTGGTGGCAGATGTGGAAGCTTGTGGTCC
AACGGAGTTGAATCATATAACCCCGCTGATAATAAGTGGACTGTGCACCCTTGTTTGAAT
GAGAAAAAAGGTAGCTTATCTGGAGCTGCTTTAAAGGACAAGATCTTTGCAGTTGGCGGT
GGAAATGGAATTGAAAGCTTTTCACAAGTTGAAATGTATGATCCTCAAGTAGGTCGATGG
ATTTCTACACGATCCATGTGGCAGAAGCGATTTGCTCTTGCAGCAGCAGAACTTAATGGT
GCACTATATGCTGTTGGTGGATTTGATGGAAACAATTATTTGGCGACTGCTGAAAGATTT
GACCCCAGAGAACATTCTTGGACAAAAATTGAGAGTATGAGCACGAAAAGAGGATCTCAT
GCGTTGGTTGCTTTGAGGGGAAAGTTATATGCACTTGGTGGCCATGATGGGTATCAAATG
GTGCCGAGCATTGAGATATATGATCCCCGTCGTGGAACATGGATGATTGGGGAACCAATG
AACTGTTCTAGGGGGTATTCAGCAGCTGCTGTTCTAAAGGAGTCCATTTATGTAATCGGA
GGGGTTAAATCTGATAATGAAATAATAGACACGATTGAATGTTACAAGGAGGATCAAGGT
TGGCAAACAACTACCTCGAGGGCTGTCGGAAAAAGGTGTTTTTCCTCTGCTGTAGTTTCG
GAGGAATGCTGA

Peptide Sequence

PEP ID

XP_016438615.1
PEP Infomation

PREDICTED: kelch-like protein 5, partial [Nicotiana tabacum]
Sequence

LIITLFLFHFVTLYSIIRILKSLTGLPIEHFSYVKNVHPGLPLFLFNYNDRKIHGIFEAV
SSGQMHINPYSWTSDGYEKTRYPAQVQIRVRLQCQPLPENQFKPIILDNYYSQNHFWFEL
DHVQSNKLISKLASLAIAPSKTLYNSANWGNIIQDLPENVMIADNGSFEPQVLENKSSSS
VDVNRKFGAGDISPCSKGSVLQLESPLDFHAALDEKDFIYKKLRELVLERECSGAPTNGH
AEERTNEVLGNPVNDVSIGKAAFRKARLPGEEKNEESSCDSAVYPSFVVQLLQGMEELIA
FNEEQHKKMGGLEQKLADIQEEIKLLKNKCLMLESSNPLRTHAGENVVDSDDVAHLNDES
IILAGGYDGVSWLSAFDSYSPLNDVFKSLKPMNSVRSFFALANLSREIYVFGGRCGSLWS
NGVESYNPADNKWTVHPCLNEKKGSLSGAALKDKIFAVGGGNGIESFSQVEMYDPQVGRW
ISTRSMWQKRFALAAAELNGALYAVGGFDGNNYLATAERFDPREHSWTKIESMSTKRGSH
ALVALRGKLYALGGHDGYQMVPSIEIYDPRRGTWMIGEPMNCSRGYSAAAVLKESIYVIG
GVKSDNEIIDTIECYKEDQGWQTTTSRAVGKRCFSSAVVSEEC

Transcript Sequence

Gene sequence data has not been registered.